Vibrio alginolyticus strain K06K5

Motilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio alginolyticus strain K06K5 is a Gram-negative bacterium predominantly found in marine environments. This strain is classified as a facultative anaerobe, allowing it to thrive in both oxygen-rich and low-oxygen conditions. The organism exhibits mobility, facilitated by the presence of flagella, which enhances its ability to navigate through aquatic habitats. The optimal growth temperature for V. alginolyticus K06K5 is around 30°C, making it well-suited to warmer marine waters. This strain contains three replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in diverse environments. Vibrio alginolyticus K06K5 has been identified as a pathogen affecting various hosts, including humans (Homo sapiens), fish species such as Sparus aurata, mollusks, and shrimp (Penaeus vannamei). It is associated with several health concerns, including septicaemia, vibriosis, gastroenteritis, and skin and muscle necrosis. Additionally, it poses risks to aquaculture, leading to diseases in farmed shrimp, fish, and mollusks. The ecological role of V. alginolyticus K06K5 highlights the delicate balance within marine ecosystems, where pathogenic strains can impact both human health and aquaculture viability. Understanding the distribution and pathogenic potential of this bacterium is critical for managing seafood safety and preserving marine biodiversity. The associated accession numbers for this strain are NZ_CP017907.1, NZ_CP017908.1, and NZ_CP017909.1, which may facilitate further research and genomic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio alginolyticus
Strainstrain K06K5

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Vibrio alginolyticus strain K06K5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature30
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens, Sparus aurata, Mollusca
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio alginolyticus strain K06K5 chromosome 2, complete sequence.

Gene Summary

Adenine Count

519153 bp

Thymine Count

518924 bp

Guanine Count

419493 bp

Cytosine Count

422159 bp

Genome Length

1879729 bp

Protein-coding Genes

1598 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidinol-phosphate transaminaseK06K5_RS05755Not AvailablePositive1211667 - 121270738229.9
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbK06K5_RS05760Not AvailablePositive1212777 - 121385039814.7
imidazole glycerol phosphate synthase subunit hishK06K5_RS05765Not AvailablePositive1213877 - 121449122284.8
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseK06K5_RS05770Not AvailablePositive1214504 - 121524126422.4
imidazole glycerol phosphate synthase subunit hisfK06K5_RS05775Not AvailablePositive1215223 - 121599628401.8
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieK06K5_RS05780Not AvailablePositive1215993 - 121662823342.8
ychj family proteinK06K5_RS05785Not AvailableNegative1216904 - 121741919376.4
eal and hdod domain-containing proteinK06K5_RS05790Not AvailableNegative1217507 - 121872146479.2
udp-2,3-diacylglucosamine diphosphataseK06K5_RS05795Not AvailableNegative1218820 - 121955728425.2
peptidylprolyl isomeraseK06K5_RS05800Not AvailableNegative1219618 - 122011218167.4

Displaying genes 3121 – 3130 of 5154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Skin and muscle necrosisCausesPMC10724927
VibriosisCausesPMC8416912
GastroenteritisCausesPMC8416912
SepticaemiaCausesPMC8416912
Diseases in farmed shrimp, fish, and molluscsCausesPMC12075680

Displaying health effects 1 – 5 of 5 in total