Silvanigrella aquatica strain MWH-Nonnen-W8red

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Oligoflexia

Order

Silvanigrellales

Family

Silvanigrellaceae

Genus

Silvanigrella

Description

Silvanigrella aquatica strain MWH-Nonnen-W8red is characterized by having two replicons, which are essential for its genomic organization and functionality. The strain is cataloged under the accessions NZ_CP017834.1 and NZ_CP017836.1, indicating its genetic sequencing has been documented in public databases, contributing to the broader understanding of its phylogenetic relationships and potential applications. The presence of two replicons suggests a complex genomic structure that may offer advantages in adaptability and metabolic versatility. This trait can influence the strain's ability to thrive in varied aquatic environments, as well as its potential interactions with other microorganisms. From a biological and ecological perspective, the unique genomic features of Silvanigrella aquatica strain MWH-Nonnen-W8red may facilitate its role in nutrient cycling within aquatic ecosystems. The strain's adaptability could enable it to utilize diverse substrates, which is critical for maintaining ecological balance and supporting microbial diversity in its habitat. Understanding the genomic characteristics of this strain can provide insights into its ecological functions and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassOligoflexia
OrderSilvanigrellales
FamilySilvanigrellaceae
GenusSilvanigrella
SpeciesSilvanigrella aquatica
Strainstrain MWH-Nonnen-W8red

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvanigrella aquatica strain MWH-Nonnen-W8red plasmid pNonnen2,

Gene Summary

Adenine Count

12197 bp

Thymine Count

14181 bp

Guanine Count

4679 bp

Cytosine Count

5931 bp

Genome Length

36988 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cof-type had-iib family hydrolaseAXG55_RS12930Not AvailableNegative3035386 - 303621630595.5
methionine--trna ligaseAXG55_RS12935Not AvailableNegative3036270 - 303827976615.0
dna-directed rna polymerase subunit omegaAXG55_RS12940Not AvailableNegative3038390 - 30386178224.29
abc transporter substrate-binding proteinAXG55_RS12945Not AvailablePositive3038816 - 304039058224.7
abc transporter permeaseAXG55_RS12950Not AvailablePositive3040400 - 304132033894.1
abc transporter permeaseAXG55_RS12955Not AvailablePositive3041317 - 304217130554.2
duf6165 family proteinAXG55_RS12960Not AvailablePositive3042189 - 304257214723.7
5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferaseAXG55_RS12965Not AvailablePositive3042767 - 304507089270.3
choline abc transporter substrate-binding proteinAXG55_RS12970Not AvailablePositive3045283 - 304622735699.1
abc transporter permeaseAXG55_RS12975Not AvailablePositive3046249 - 304709130822.8

Displaying genes 2631 – 2640 of 2913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.