Silvanigrella aquatica strain MWH-Nonnen-W8red

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Oligoflexia

Order

Silvanigrellales

Family

Silvanigrellaceae

Genus

Silvanigrella

Description

Silvanigrella aquatica strain MWH-Nonnen-W8red is characterized by having two replicons, which are essential for its genomic organization and functionality. The strain is cataloged under the accessions NZ_CP017834.1 and NZ_CP017836.1, indicating its genetic sequencing has been documented in public databases, contributing to the broader understanding of its phylogenetic relationships and potential applications. The presence of two replicons suggests a complex genomic structure that may offer advantages in adaptability and metabolic versatility. This trait can influence the strain's ability to thrive in varied aquatic environments, as well as its potential interactions with other microorganisms. From a biological and ecological perspective, the unique genomic features of Silvanigrella aquatica strain MWH-Nonnen-W8red may facilitate its role in nutrient cycling within aquatic ecosystems. The strain's adaptability could enable it to utilize diverse substrates, which is critical for maintaining ecological balance and supporting microbial diversity in its habitat. Understanding the genomic characteristics of this strain can provide insights into its ecological functions and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassOligoflexia
OrderSilvanigrellales
FamilySilvanigrellaceae
GenusSilvanigrella
SpeciesSilvanigrella aquatica
Strainstrain MWH-Nonnen-W8red

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvanigrella aquatica strain MWH-Nonnen-W8red plasmid pNonnen2,

Gene Summary

Adenine Count

12197 bp

Thymine Count

14181 bp

Guanine Count

4679 bp

Cytosine Count

5931 bp

Genome Length

36988 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bamdAXG55_RS12580Not AvailableNegative2955468 - 295624129777.2
methylmalonyl-coa epimeraseAXG55_RS12585Not AvailableNegative2956272 - 295668215427.6
methylmalonyl co-a mutase-associated gtpase meabAXG55_RS12590Not AvailableNegative2956679 - 295770137765.0
acetyl-coa carboxylase biotin carboxyl carrier protein subunitAXG55_RS12595Not AvailableNegative2957710 - 295826720577.2
acetyl-coa carboxylase biotin carboxylase subunitAXG55_RS12600Not AvailableNegative2958285 - 295982957307.5
acyl-coa carboxylase subunit betaAXG55_RS12605Not AvailableNegative2959874 - 296143056739.2
cobalamin b12-binding domain-containing proteinAXG55_RS12610Not AvailableNegative2961435 - 296192617306.8
uridine kinaseAXG55_RS12615Not AvailablePositive2962093 - 296280327154.7
hypothetical proteinAXG55_RS12620Not AvailablePositive2963086 - 29633229469.4
abc transporter substrate-binding proteinAXG55_RS12625Not AvailablePositive2963745 - 296539763693.0

Displaying genes 2561 – 2570 of 2913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.