Silvanigrella aquatica strain MWH-Nonnen-W8red

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Oligoflexia

Order

Silvanigrellales

Family

Silvanigrellaceae

Genus

Silvanigrella

Description

Silvanigrella aquatica strain MWH-Nonnen-W8red is characterized by having two replicons, which are essential for its genomic organization and functionality. The strain is cataloged under the accessions NZ_CP017834.1 and NZ_CP017836.1, indicating its genetic sequencing has been documented in public databases, contributing to the broader understanding of its phylogenetic relationships and potential applications. The presence of two replicons suggests a complex genomic structure that may offer advantages in adaptability and metabolic versatility. This trait can influence the strain's ability to thrive in varied aquatic environments, as well as its potential interactions with other microorganisms. From a biological and ecological perspective, the unique genomic features of Silvanigrella aquatica strain MWH-Nonnen-W8red may facilitate its role in nutrient cycling within aquatic ecosystems. The strain's adaptability could enable it to utilize diverse substrates, which is critical for maintaining ecological balance and supporting microbial diversity in its habitat. Understanding the genomic characteristics of this strain can provide insights into its ecological functions and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassOligoflexia
OrderSilvanigrellales
FamilySilvanigrellaceae
GenusSilvanigrella
SpeciesSilvanigrella aquatica
Strainstrain MWH-Nonnen-W8red

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvanigrella aquatica strain MWH-Nonnen-W8red plasmid pNonnen2,

Gene Summary

Adenine Count

12197 bp

Thymine Count

14181 bp

Guanine Count

4679 bp

Cytosine Count

5931 bp

Genome Length

36988 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lptf/lptg family permeaseAXG55_RS06075Not AvailablePositive1462070 - 146316141753.1
pentapeptide repeat-containing proteinAXG55_RS06080Not AvailablePositive1463165 - 146410935713.1
type i glyceraldehyde-3-phosphate dehydrogenaseAXG55_RS06085Not AvailablePositive1464229 - 146523636300.6
hypothetical proteinAXG55_RS06090Not AvailableNegative1465297 - 146635540188.5
hypothetical proteinAXG55_RS14825Not AvailablePositive1466581 - 146703316379.7
a/g-specific adenine glycosylaseAXG55_RS06100Not AvailablePositive1467184 - 146814936507.1
aldehyde dehydrogenase family proteinAXG55_RS06105Not AvailablePositive1468182 - 146971456584.1
hypothetical proteinAXG55_RS06110Not AvailablePositive1469752 - 147083441418.8
hlyd family secretion proteinAXG55_RS06115Not AvailablePositive1470864 - 147205142681.2
dha2 family efflux mfs transporter permease subunitAXG55_RS06120Not AvailablePositive1472071 - 147363357684.3

Displaying genes 1271 – 1280 of 2913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.