Silvanigrella aquatica strain MWH-Nonnen-W8red

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Oligoflexia

Order

Silvanigrellales

Family

Silvanigrellaceae

Genus

Silvanigrella

Description

Silvanigrella aquatica strain MWH-Nonnen-W8red is characterized by having two replicons, which are essential for its genomic organization and functionality. The strain is cataloged under the accessions NZ_CP017834.1 and NZ_CP017836.1, indicating its genetic sequencing has been documented in public databases, contributing to the broader understanding of its phylogenetic relationships and potential applications. The presence of two replicons suggests a complex genomic structure that may offer advantages in adaptability and metabolic versatility. This trait can influence the strain's ability to thrive in varied aquatic environments, as well as its potential interactions with other microorganisms. From a biological and ecological perspective, the unique genomic features of Silvanigrella aquatica strain MWH-Nonnen-W8red may facilitate its role in nutrient cycling within aquatic ecosystems. The strain's adaptability could enable it to utilize diverse substrates, which is critical for maintaining ecological balance and supporting microbial diversity in its habitat. Understanding the genomic characteristics of this strain can provide insights into its ecological functions and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassOligoflexia
OrderSilvanigrellales
FamilySilvanigrellaceae
GenusSilvanigrella
SpeciesSilvanigrella aquatica
Strainstrain MWH-Nonnen-W8red

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvanigrella aquatica strain MWH-Nonnen-W8red plasmid pNonnen2,

Gene Summary

Adenine Count

12197 bp

Thymine Count

14181 bp

Guanine Count

4679 bp

Cytosine Count

5931 bp

Genome Length

36988 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5'/3'-nucleotidase sureAXG55_RS05220Not AvailablePositive1237239 - 123801227842.7
kama family radical sam proteinAXG55_RS05225Not AvailablePositive1238009 - 123907640829.6
sdr family nad(p)-dependent oxidoreductaseAXG55_RS05230Not AvailablePositive1239090 - 123989329368.7
transporter substrate-binding domain-containing proteinAXG55_RS05235Not AvailablePositive1240072 - 124080928806.9
murein tripeptide/oligopeptide abc transporter atp binding protein oppfAXG55_RS05240Not AvailableNegative1240883 - 124186035984.5
oligopeptide/dipeptide abc transporter atp-binding proteinAXG55_RS05245Not AvailableNegative1241857 - 124282235139.2
oligopeptide abc transporter permease oppcAXG55_RS05250Not AvailableNegative1242840 - 124376634098.2
oligopeptide abc transporter permease oppbAXG55_RS05255Not AvailableNegative1243783 - 124470333411.7
peptide abc transporter substrate-binding proteinAXG55_RS05260Not AvailableNegative1244819 - 124647462196.4
methionine synthaseAXG55_RS05265Not AvailableNegative1246831 - 1250349130719.0

Displaying genes 1101 – 1110 of 2913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.