Rhodobacter xanthinilyticus strain LPB0142

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter xanthinilyticus strain LPB0142 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates motility in various environments. This strain has a unique genomic structure, possessing two replicons, indicating a complex genetic organization that may contribute to its adaptability and functional versatility. The strain is cataloged under two accession numbers, NZ_CP017781.1 and NZ_CP017783.1, which provide access to its genomic data for further investigation by researchers. The presence of two replicons suggests that R. xanthinilyticus LPB0142 may possess distinct genomic elements that could influence its metabolic pathways and ecological interactions. Biologically, Rhodobacter xanthinilyticus species are known for their role in phototrophic processes, which are essential in various ecosystems. The ability of this strain to utilize light for energy could enhance its ecological role in environments such as aquatic systems, where it may contribute to nutrient cycling and primary production. The combination of its motility and genomic features positions R. xanthinilyticus LPB0142 as a potentially significant player in biogeochemical processes, emphasizing the importance of studying its traits for understanding microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter xanthinilyticus strain LPB0142 chromosome, complete

Gene Summary

Adenine Count

569658 bp

Thymine Count

560892 bp

Guanine Count

1145958 bp

Cytosine Count

1186418 bp

Genome Length

3462926 bp

Protein-coding Genes

3294 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLPB142_RS19135Not AvailablePositive3198111 - 31982605392.43
duf2274 domain-containing proteinLPB142_RS15570Not AvailableNegative3198261 - 31984828207.19
trbi/virb10 family proteinLPB142_RS15575Not AvailableNegative3198485 - 319962439876.8
p-type conjugative transfer protein trbgLPB142_RS15580Not AvailableNegative3199621 - 320063436337.5
conjugal transfer protein trbfLPB142_RS15585Not AvailableNegative3200631 - 320132025844.6
p-type conjugative transfer protein trblLPB142_RS15590Not AvailableNegative3201320 - 320267244180.8
putative entry exclusion protein trbk-altLPB142_RS15595Not AvailableNegative3202676 - 320296310177.2
p-type conjugative transfer protein trbjLPB142_RS15600Not AvailableNegative3202985 - 320376427774.9
conjugal transfer protein trbeLPB142_RS15605Not AvailableNegative3203767 - 320625390387.9
virb3 family type iv secretion system proteinLPB142_RS15610Not AvailableNegative3206264 - 32065459868.46

Displaying genes 3221 – 3230 of 3449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.