Rhodobacter xanthinilyticus strain LPB0142

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter xanthinilyticus strain LPB0142 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates motility in various environments. This strain has a unique genomic structure, possessing two replicons, indicating a complex genetic organization that may contribute to its adaptability and functional versatility. The strain is cataloged under two accession numbers, NZ_CP017781.1 and NZ_CP017783.1, which provide access to its genomic data for further investigation by researchers. The presence of two replicons suggests that R. xanthinilyticus LPB0142 may possess distinct genomic elements that could influence its metabolic pathways and ecological interactions. Biologically, Rhodobacter xanthinilyticus species are known for their role in phototrophic processes, which are essential in various ecosystems. The ability of this strain to utilize light for energy could enhance its ecological role in environments such as aquatic systems, where it may contribute to nutrient cycling and primary production. The combination of its motility and genomic features positions R. xanthinilyticus LPB0142 as a potentially significant player in biogeochemical processes, emphasizing the importance of studying its traits for understanding microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter xanthinilyticus strain LPB0142 chromosome, complete

Gene Summary

Adenine Count

569658 bp

Thymine Count

560892 bp

Guanine Count

1145958 bp

Cytosine Count

1186418 bp

Genome Length

3462926 bp

Protein-coding Genes

3294 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLPB142_RS12855Not AvailablePositive2645428 - 26456437591.63
ubih/ubif family hydroxylaseLPB142_RS12860Not AvailablePositive2645712 - 264691743093.3
urea abc transporter atp-binding subunit urteLPB142_RS12865Not AvailableNegative2647039 - 264773425357.1
urea abc transporter atp-binding protein urtdLPB142_RS12870Not AvailableNegative2647737 - 264847727106.8
urea abc transporter permease subunit urtcLPB142_RS12875Not AvailableNegative2648474 - 264970343454.7
urea abc transporter permease subunit urtbLPB142_RS12880Not AvailableNegative2649707 - 265169269339.5
urea abc transporter substrate-binding proteinLPB142_RS12885Not AvailableNegative2651747 - 265302146002.2
urease accessory protein uregLPB142_RS12890Not AvailableNegative2653271 - 265390322088.6
urease accessory protein urefLPB142_RS12895Not AvailableNegative2653900 - 265454722388.7
urease accessory protein ureeLPB142_RS12900Not AvailableNegative2654534 - 265503117524.2

Displaying genes 2671 – 2680 of 3449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.