Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Loigolactobacillus

Description

Loigolactobacillus coryniformis subsp. torquens DSM 20004, also known by its KCTC designation, is a rod-shaped bacterium. This species is characterized by possessing two replicons, which are essential for its genetic stability and the regulation of its cellular processes. The strain has been cataloged with specific accessions, namely NZ_CP017697.1 and NZ_CP017698.1, which provide unique identifiers for its genomic sequences in public databases. These accessions allow researchers to access its genetic information, facilitating further studies on its properties and potential applications. In terms of its ecological role, Loigolactobacillus coryniformis subsp. torquens is part of the lactic acid bacteria group, which is known for its beneficial contributions to food fermentation processes. The rod shape of this bacterium may influence its ability to form biofilms and interact with other microorganisms in its environment, potentially affecting its role in fermentation and health-related applications. In summary, Loigolactobacillus coryniformis subsp. torquens DSM 20004 is a rod-shaped bacterium with two replicons, identified by unique genomic accessions, highlighting its importance in microbial ecology and potential utility in food science and probiotic research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLoigolactobacillus
SpeciesLoigolactobacillus coryniformis
Strainsubsp. torquens DSM 20004 = KCTC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC

Gene Summary

Adenine Count

22225 bp

Thymine Count

22585 bp

Guanine Count

14744 bp

Cytosine Count

15547 bp

Genome Length

75101 bp

Protein-coding Genes

78 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeaseLC20004_RS02965Not AvailableNegative634865 - 63555125326.7
transporter substrate-binding domain-containing proteinLC20004_RS02970Not AvailableNegative635658 - 63645828861.1
hydroxymethylglutaryl-coa reductase, degradativeLC20004_RS02975Not AvailablePositive636721 - 63798044421.2
hypothetical proteinLC20004_RS02980Not AvailablePositive638372 - 6386179784.59
heavy metal translocating p-type atpaseLC20004_RS02985Not AvailablePositive638924 - 64075063934.6
isochorismate synthase menfLC20004_RS02990Not AvailablePositive641036 - 64233746596.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseLC20004_RS02995Not AvailablePositive642327 - 64401261297.4
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseLC20004_RS03000Not AvailablePositive644005 - 64481430227.8
o-succinylbenzoate synthaseLC20004_RS03005Not AvailablePositive644814 - 64592640391.0
apc family permeaseLC20004_RS03010Not AvailableNegative645940 - 64726847805.4

Displaying genes 791 – 800 of 2969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.