Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Loigolactobacillus

Description

Loigolactobacillus coryniformis subsp. torquens DSM 20004, also known by its KCTC designation, is a rod-shaped bacterium. This species is characterized by possessing two replicons, which are essential for its genetic stability and the regulation of its cellular processes. The strain has been cataloged with specific accessions, namely NZ_CP017697.1 and NZ_CP017698.1, which provide unique identifiers for its genomic sequences in public databases. These accessions allow researchers to access its genetic information, facilitating further studies on its properties and potential applications. In terms of its ecological role, Loigolactobacillus coryniformis subsp. torquens is part of the lactic acid bacteria group, which is known for its beneficial contributions to food fermentation processes. The rod shape of this bacterium may influence its ability to form biofilms and interact with other microorganisms in its environment, potentially affecting its role in fermentation and health-related applications. In summary, Loigolactobacillus coryniformis subsp. torquens DSM 20004 is a rod-shaped bacterium with two replicons, identified by unique genomic accessions, highlighting its importance in microbial ecology and potential utility in food science and probiotic research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLoigolactobacillus
SpeciesLoigolactobacillus coryniformis
Strainsubsp. torquens DSM 20004 = KCTC

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC

Gene Summary

Adenine Count

22225 bp

Thymine Count

22585 bp

Guanine Count

14744 bp

Cytosine Count

15547 bp

Genome Length

75101 bp

Protein-coding Genes

78 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uracil-xanthine permease family proteinLC20004_RS07995Not AvailableNegative1639804 - 164107844938.7
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrLC20004_RS08000Not AvailableNegative1641244 - 164179520636.1
rlua family pseudouridine synthaseLC20004_RS08005Not AvailableNegative1641969 - 164288333560.6
signal peptidase iiLC20004_RS08010Not AvailableNegative1642886 - 164333516982.5
uracil-dna glycosylaseLC20004_RS08015Not AvailableNegative1643351 - 164398623636.5
formate--tetrahydrofolate ligaseLC20004_RS08020Not AvailableNegative1643986 - 164565959646.1
ebsa family proteinLC20004_RS08025Not AvailableNegative1645744 - 164615115814.5
ribonuclease hi family proteinLC20004_RS08030Not AvailablePositive1646281 - 164668214924.9
nitroreductase family proteinLC20004_RS08035Not AvailableNegative1646722 - 164732422497.5
is30 family transposaseLC20004_RS08040Not AvailablePositive1647713 - 164874438981.1

Displaying genes 1701 – 1710 of 2969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.