Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | BJJ90_RS34660 | Not Available | Negative | 34223 - 34477 | 9062.85 |
| smods domain-containing nucleotidyltransferase | BJJ90_RS31130 | Not Available | Positive | 34759 - 35754 | 37838.7 |
| s-4tm family putative pore-forming effector | BJJ90_RS31135 | Not Available | Positive | 35758 - 36690 | 36203.2 |
| hypothetical protein | BJJ90_RS31140 | Not Available | Positive | 36988 - 38076 | 40472.8 |
| hypothetical protein | BJJ90_RS31145 | Not Available | Positive | 38078 - 38947 | 33496.9 |
| aaa family atpase | BJJ90_RS31150 | Not Available | Negative | 39004 - 40569 | 58656.0 |
| type ii toxin-antitoxin system vapb family antitoxin | BJJ90_RS31155 | Not Available | Positive | 40877 - 41107 | 8816.38 |
| is1 family transposase | BJJ90_RS31160 | Not Available | Positive | 41104 - 41250 | 5591.9 |
| is6-like element is26 family transposase | BJJ90_RS31165 | Not Available | Positive | 41290 - 41994 | 27896.9 |
| is1 family transposase | BJJ90_RS31175 | Not Available | Positive | 42046 - 43812 | 65666.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





