Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trae/trak family type iv conjugative transfer system protein | BJJ90_RS30405 | Not Available | Negative | 289342 - 290130 | 29314.2 |
| type iv conjugative transfer system protein tral | BJJ90_RS30410 | Not Available | Negative | 290142 - 290459 | 12257.1 |
| is4-like element is421 family transposase | BJJ90_RS30420 | Not Available | Negative | 290658 - 291770 | 40911.1 |
| hypothetical protein | BJJ90_RS34365 | Not Available | Negative | 291860 - 292033 | 5929.66 |
| is30-like element isapl1 family transposase | BJJ90_RS30430 | Not Available | Negative | 292161 - 293135 | 37701.3 |
| repb family plasmid replication initiator protein | BJJ90_RS30445 | Not Available | Negative | 294434 - 295309 | 33238.4 |
| hypothetical protein | BJJ90_RS30450 | Not Available | Positive | 295786 - 296841 | 39482.0 |
| hypothetical protein | BJJ90_RS30455 | Not Available | Positive | 296859 - 297059 | 7863.54 |
| zinc finger-like domain-containing protein | BJJ90_RS30460 | Not Available | Positive | 297056 - 297772 | 26864.1 |
| hypothetical protein | BJJ90_RS30465 | Not Available | Positive | 298007 - 298861 | 32645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





