Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | BJJ90_RS31080 | Not Available | Negative | 27342 - 28220 | 33703.4 |
| is21-like element issso4 family helper atpase istb | BJJ90_RS31085 | Not Available | Negative | 28319 - 29074 | 28540.3 |
| is21 family transposase | BJJ90_RS31090 | Not Available | Negative | 29091 - 30626 | 58934.3 |
| is1 family transposase | BJJ90_RS31095 | Not Available | Negative | 30857 - 31186 | 12182.7 |
| hypothetical protein | BJJ90_RS31100 | Not Available | Negative | 31196 - 31384 | 6943.65 |
| hypothetical protein | BJJ90_RS33575 | Not Available | Positive | 31614 - 31718 | 3983.06 |
| hypothetical protein | BJJ90_RS31105 | Not Available | Positive | 31847 - 32104 | 9910.76 |
| site-specific integrase | BJJ90_RS31110 | Not Available | Negative | 32162 - 32938 | 28724.1 |
| hypothetical protein | BJJ90_RS31115 | Not Available | Negative | 32935 - 33678 | 28289.7 |
| hypothetical protein | BJJ90_RS31120 | Not Available | Negative | 33729 - 34079 | 13419.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





