Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6-like element is6100 family transposase | BJJ90_RS29855 | Not Available | Negative | 188743 - 189507 | 29684.0 |
| is6-like element is26 family transposase | BJJ90_RS29865 | Not Available | Negative | 189675 - 190379 | 27953.9 |
| duf5431 family protein | BJJ90_RS29875 | Not Available | Negative | 190444 - 190820 | 13402.2 |
| arsr/smtb family transcription factor | BJJ90_RS29885 | Not Available | Negative | 190922 - 191245 | 11781.3 |
| permease | BJJ90_RS29890 | Not Available | Positive | 191351 - 192484 | 39839.7 |
| duf5431 family protein | BJJ90_RS29895 | Not Available | Negative | 192612 - 193016 | 15539.4 |
| hypothetical protein | BJJ90_RS33560 | Not Available | Positive | 193184 - 193393 | 7933.4 |
| is21-like element issso4 family helper atpase istb | BJJ90_RS29905 | Not Available | Negative | 193410 - 194165 | 28540.3 |
| is21 family transposase | BJJ90_RS29910 | Not Available | Negative | 194182 - 195717 | 58934.3 |
| hypothetical protein | BJJ90_RS33725 | Not Available | Negative | 195829 - 196062 | 8751.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





