Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombinase | BJJ90_RS29470 | Not Available | Positive | 132092 - 133123 | 38556.3 |
| C8 | BJJ90_RS29475 | Not Available | Positive | 133174 - 133461 | 10446.4 |
| Is110 family transposase | BJJ90_RS29480 | Not Available | Negative | 133643 - 134647 | 37469.7 |
| Attr | Not Available | Not Available | Positive | 140718 - 140780 | Not Available |
| thioredoxin family protein | BJJ90_RS28680 | Not Available | Positive | 1 - 1047 | 39302.1 |
| inchi-type conjugal transfer protein trhh | BJJ90_RS28685 | Not Available | Positive | 1037 - 2452 | 50430.4 |
| conjugal transfer protein trag n-terminal domain-containing protein | BJJ90_RS28690 | Not Available | Positive | 2461 - 6414 | 139803.0 |
| hnh endonuclease signature motif containing protein | BJJ90_RS28695 | Not Available | Positive | 6595 - 7884 | 49440.2 |
| had domain-containing protein | BJJ90_RS28700 | Not Available | Negative | 7992 - 8510 | 19666.6 |
| lytic transglycosylase domain-containing protein | BJJ90_RS28705 | Not Available | Negative | 8641 - 9180 | 20635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





