Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Pdca | BJJ90_RS29410 | Not Available | Positive | 123826 - 124005 | 6775.69 |
| Conserved protein of unknown function pdcb | BJJ90_RS29415 | Not Available | Positive | 124033 - 125076 | 39651.7 |
| Late promoter-activating protein lpa | BJJ90_RS29420 | Not Available | Positive | 125165 - 125617 | 18118.8 |
| Terminase a protein paca | BJJ90_RS29425 | Not Available | Positive | 125703 - 126896 | 45381.6 |
| Pacb | BJJ90_RS29430 | Not Available | Positive | 126896 - 128380 | 55607.6 |
| Hypothetical protein | BJJ90_RS29435 | Not Available | Positive | 128603 - 128716 | 3615.39 |
| Icd | BJJ90_RS29440 | Not Available | Positive | 128741 - 128962 | 8395.8 |
| Antirepressor protein | BJJ90_RS29445 | Not Available | Positive | 128959 - 130071 | 41970.5 |
| Repressor protein c1 | BJJ90_RS29450 | Not Available | Negative | 130104 - 130955 | 32501.0 |
| Cre-associated protein | BJJ90_RS29465 | Not Available | Positive | 131863 - 132084 | 8676.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





