Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SLK172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
27900 bp
Thymine Count
29081 bp
Guanine Count
30642 bp
Cytosine Count
32905 bp
Genome Length
120528 bp
Protein-coding Genes
150 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombination-associated protein rdgc | BJJ90_RS29205 | Not Available | Positive | 94434 - 95339 | 33626.4 |
| Dmt | BJJ90_RS29210 | Not Available | Positive | 95336 - 97600 | 83417.0 |
| Transposase isec46, is605 family | BJJ90_RS29215 | Not Available | Positive | 97971 - 99140 | 43617.4 |
| Is21 transposase | BJJ90_RS29220 | Not Available | Positive | 99860 - 101395 | 58934.3 |
| Transposase/is protein | BJJ90_RS29225 | Not Available | Positive | 101412 - 102167 | 28540.3 |
| hypothetical protein | BJJ90_RS29230 | Not Available | Positive | 102631 - 103566 | 36565.9 |
| Putative glycosyltransferase, dbn | BJJ90_RS29235 | Not Available | Positive | 103782 - 104291 | 19226.4 |
| hypothetical protein | BJJ90_RS29240 | Not Available | Negative | 104298 - 104999 | 26861.2 |
| hypothetical protein | BJJ90_RS29245 | Not Available | Negative | 105058 - 105360 | 10886.3 |
| Base plate protein gp5 | BJJ90_RS29250 | Not Available | Negative | 105465 - 106097 | 21766.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





