Escherichia coli strain SLK172

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SLK172 is a Gram-negative, rod-shaped bacterium that typically exhibits cell arrangements in pairs or singles. This strain thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to host-associated environments. E. coli is classified as a facultative anaerobe, allowing it to utilize both aerobic and anaerobic metabolic pathways, thereby enhancing its survival in diverse conditions within host organisms. The ability of E. coli strain SLK172 to exist in pairs and singles may reflect its physiological adaptations for nutrient acquisition and interaction within the host microbiome. Its Gram-negative cell wall structure contributes to its resilience and adaptability in various environments, particularly those within the gastrointestinal tract of mammals, where it is commonly found. Given its optimal growth temperature and habitat, strain SLK172 likely plays a role in the complex microbial communities associated with the gastrointestinal systems of its hosts. This suggests that E. coli strain SLK172 may contribute to metabolic processes such as fermentation and nutrient cycling, which are essential for host health and homeostasis. Further research into this strain could provide insights into its specific interactions within the microbial ecosystem and its potential roles in host metabolism.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain SLK172

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SLK172
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain SLK172


Gene Summary

Adenine Count

27900 bp

Thymine Count

29081 bp

Guanine Count

30642 bp

Cytosine Count

32905 bp

Genome Length

120528 bp

Protein-coding Genes

150 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is6-like element is26 family transposaseBJJ90_RS30895Not Available+1 - 70527953.9
extended-spectrum class a beta-lactamase ctx-m-55BJJ90_RS30910Not Available+1127 - 200231173.4
wbuc family cupin fold metalloproteinBJJ90_RS30915Not Available-2049 - 252517478.8
is1 family transposaseBJJ90_RS30920Not Available-2784 - 352727147.6
is6-like element is26 family transposaseBJJ90_RS30925Not Available-3577 - 428127896.9
fosfomycin resistance glutathione transferase fosa3BJJ90_RS30935Not Available+4667 - 508315402.2
fidl-like proteinBJJ90_RS30940Not Available-5088 - 560619343.1
transcriptional regulatorBJJ90_RS30945Not Available-5606 - 639429670.1
is1 family transposaseBJJ90_RS30950Not Available-6414 - 683915908.3
is6-like element is26 family transposaseBJJ90_RS30960Not Available-6894 - 759827896.9

Displaying genes 1 – 10 of 547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites