Luteibacter rhizovicinus DSM 16549 strain LJ96

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LJ96, classified under the DSM 16549 designation, is a Gram-negative bacterium. It possesses a single replicon, which is characteristic of many bacterial species and suggests a streamlined genomic architecture. The strain is documented in the genomic database with the accession number NZ_CP017480.1, allowing for further exploration of its genetic and biochemical properties. As a member of the genus Luteibacter, this strain may play a role in plant-associated environments, potentially influencing plant health and soil dynamics. The Gram-negative nature of Luteibacter rhizovicinus indicates that it has a complex cell wall structure, which often contributes to its adaptability in various ecological niches. Understanding the traits of Luteibacter rhizovicinus strain LJ96 is essential for elucidating its ecological roles, particularly in rhizosphere interactions. The presence of this bacterium in soil environments may suggest its involvement in nutrient cycling or its potential as a bioindicator of soil health. Further research could reveal its specific functions and applications in agriculture or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
StrainDSM 16549 strain LJ96

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus DSM 16549 strain LJ96 chromosome,

Gene Summary

Adenine Count

842045 bp

Thymine Count

839132 bp

Guanine Count

1542978 bp

Cytosine Count

1541331 bp

Genome Length

4765486 bp

Protein-coding Genes

4272 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(55) synthase trubBJI69_RS21360Not AvailableNegative4674221 - 467513832690.8
30s ribosome-binding factor rbfaBJI69_RS21365Not AvailableNegative4675265 - 467564814524.3
translation initiation factor if-2BJI69_RS21370Not AvailableNegative4675725 - 4678673103680.0
transcription termination factor nusaBJI69_RS21375Not AvailableNegative4678807 - 468032155346.3
ribosome maturation factor rimpBJI69_RS21380Not AvailableNegative4680367 - 468091219889.5
ggdef domain-containing proteinBJI69_RS21385Not AvailablePositive4681249 - 468240041309.4
gfa family proteinBJI69_RS21390Not AvailableNegative4682528 - 468295015204.9
s41 family peptidaseBJI69_RS21395Not AvailableNegative4682999 - 468442950198.7
giy-yig nuclease family proteinBJI69_RS21400Not AvailablePositive4684552 - 468518124036.5
glxa family transcriptional regulatorBJI69_RS21405Not AvailableNegative4685185 - 468618335453.0

Displaying genes 4281 – 4290 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.