Luteibacter rhizovicinus DSM 16549 strain LJ96

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LJ96, classified under the DSM 16549 designation, is a Gram-negative bacterium. It possesses a single replicon, which is characteristic of many bacterial species and suggests a streamlined genomic architecture. The strain is documented in the genomic database with the accession number NZ_CP017480.1, allowing for further exploration of its genetic and biochemical properties. As a member of the genus Luteibacter, this strain may play a role in plant-associated environments, potentially influencing plant health and soil dynamics. The Gram-negative nature of Luteibacter rhizovicinus indicates that it has a complex cell wall structure, which often contributes to its adaptability in various ecological niches. Understanding the traits of Luteibacter rhizovicinus strain LJ96 is essential for elucidating its ecological roles, particularly in rhizosphere interactions. The presence of this bacterium in soil environments may suggest its involvement in nutrient cycling or its potential as a bioindicator of soil health. Further research could reveal its specific functions and applications in agriculture or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
StrainDSM 16549 strain LJ96

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus DSM 16549 strain LJ96 chromosome,

Gene Summary

Adenine Count

842045 bp

Thymine Count

839132 bp

Guanine Count

1542978 bp

Cytosine Count

1541331 bp

Genome Length

4765486 bp

Protein-coding Genes

4272 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssgBJI69_RS17985Not AvailablePositive3934224 - 393526438347.1
type vi secretion system atpase tsshBJI69_RS17990Not AvailablePositive3935261 - 393796697893.6
hypothetical proteinBJI69_RS17995Not AvailablePositive3937959 - 393861824462.9
hypothetical proteinBJI69_RS18000Not AvailablePositive3938671 - 393928522246.1
type vi secretion system vgr family proteinBJI69_RS18005Not AvailablePositive3939282 - 394124671551.4
duf6931 family proteinBJI69_RS18010Not AvailablePositive3941285 - 394178817657.3
type vi secretion system-associated fha domain protein taghBJI69_RS18015Not AvailablePositive3941785 - 394318550052.9
type vi secretion system baseplate subunit tsskBJI69_RS18020Not AvailablePositive3943198 - 394453849285.4
type ivb secretion system protein icmh/dotuBJI69_RS18025Not AvailablePositive3944543 - 394585347224.6
type vi secretion system membrane subunit tssmBJI69_RS18030Not AvailablePositive3945850 - 3949401127492.0

Displaying genes 3601 – 3610 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.