Luteibacter rhizovicinus DSM 16549 strain LJ96

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LJ96, classified under the DSM 16549 designation, is a Gram-negative bacterium. It possesses a single replicon, which is characteristic of many bacterial species and suggests a streamlined genomic architecture. The strain is documented in the genomic database with the accession number NZ_CP017480.1, allowing for further exploration of its genetic and biochemical properties. As a member of the genus Luteibacter, this strain may play a role in plant-associated environments, potentially influencing plant health and soil dynamics. The Gram-negative nature of Luteibacter rhizovicinus indicates that it has a complex cell wall structure, which often contributes to its adaptability in various ecological niches. Understanding the traits of Luteibacter rhizovicinus strain LJ96 is essential for elucidating its ecological roles, particularly in rhizosphere interactions. The presence of this bacterium in soil environments may suggest its involvement in nutrient cycling or its potential as a bioindicator of soil health. Further research could reveal its specific functions and applications in agriculture or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
StrainDSM 16549 strain LJ96

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus DSM 16549 strain LJ96 chromosome,

Gene Summary

Adenine Count

842045 bp

Thymine Count

839132 bp

Guanine Count

1542978 bp

Cytosine Count

1541331 bp

Genome Length

4765486 bp

Protein-coding Genes

4272 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family dna-binding transcriptional regulatorBJI69_RS17935Not AvailablePositive3924152 - 392509634305.5
gfo/idh/moca family proteinBJI69_RS17940Not AvailableNegative3925106 - 392663556053.9
hypothetical proteinBJI69_RS17945Not AvailableNegative3926750 - 392749928125.8
yfbm family proteinBJI69_RS17950Not AvailablePositive3927747 - 392822917267.2
hypothetical proteinBJI69_RS17955Not AvailableNegative3928296 - 392906626902.6
type vi secretion system contractile sheath small subunitBJI69_RS17960Not AvailablePositive3929323 - 392983818466.0
type vi secretion system contractile sheath large subunitBJI69_RS17965Not AvailablePositive3929842 - 393133555347.1
hcp family type vi secretion system effectorBJI69_RS17970Not AvailablePositive3931373 - 393187917788.8
type vi secretion system baseplate subunit tsseBJI69_RS17975Not AvailablePositive3931887 - 393239018914.5
type vi secretion system baseplate subunit tssfBJI69_RS17980Not AvailablePositive3932395 - 393426068992.6

Displaying genes 3591 – 3600 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.