Luteibacter rhizovicinus DSM 16549 strain LJ96

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LJ96, classified under the DSM 16549 designation, is a Gram-negative bacterium. It possesses a single replicon, which is characteristic of many bacterial species and suggests a streamlined genomic architecture. The strain is documented in the genomic database with the accession number NZ_CP017480.1, allowing for further exploration of its genetic and biochemical properties. As a member of the genus Luteibacter, this strain may play a role in plant-associated environments, potentially influencing plant health and soil dynamics. The Gram-negative nature of Luteibacter rhizovicinus indicates that it has a complex cell wall structure, which often contributes to its adaptability in various ecological niches. Understanding the traits of Luteibacter rhizovicinus strain LJ96 is essential for elucidating its ecological roles, particularly in rhizosphere interactions. The presence of this bacterium in soil environments may suggest its involvement in nutrient cycling or its potential as a bioindicator of soil health. Further research could reveal its specific functions and applications in agriculture or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
StrainDSM 16549 strain LJ96

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus DSM 16549 strain LJ96 chromosome,

Gene Summary

Adenine Count

842045 bp

Thymine Count

839132 bp

Guanine Count

1542978 bp

Cytosine Count

1541331 bp

Genome Length

4765486 bp

Protein-coding Genes

4272 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin-type n-terminal cleavage/methylation domain-containing proteinBJI69_RS16335Not AvailablePositive3566276 - 356680619073.0
n(4)-(beta-n-acetylglucosaminyl)-l-asparaginaseBJI69_RS16345Not AvailablePositive3567014 - 356803335781.4
copper homeostasis protein cutcBJI69_RS16350Not AvailablePositive3568036 - 356875524592.4
ligase-associated dna damage response endonuclease pdemBJI69_RS16355Not AvailableNegative3568783 - 356944524214.2
ligase-associated dna damage response dexh box helicaseBJI69_RS16360Not AvailableNegative3569442 - 357188389967.7
atp-dependent dna ligaseBJI69_RS16365Not AvailableNegative3571840 - 357343559518.3
ligase-associated dna damage response exonucleaseBJI69_RS16370Not AvailableNegative3573435 - 357445737169.4
abc transporter transmembrane domain-containing proteinBJI69_RS16375Not AvailableNegative3574504 - 357626762707.4
impact family proteinBJI69_RS16380Not AvailableNegative3576323 - 357691921312.5
hypothetical proteinBJI69_RS16385Not AvailableNegative3576916 - 357788132758.8

Displaying genes 3271 – 3280 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.