Luteibacter rhizovicinus DSM 16549 strain LJ96

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Luteibacter

Description

Luteibacter rhizovicinus strain LJ96, classified under the DSM 16549 designation, is a Gram-negative bacterium. It possesses a single replicon, which is characteristic of many bacterial species and suggests a streamlined genomic architecture. The strain is documented in the genomic database with the accession number NZ_CP017480.1, allowing for further exploration of its genetic and biochemical properties. As a member of the genus Luteibacter, this strain may play a role in plant-associated environments, potentially influencing plant health and soil dynamics. The Gram-negative nature of Luteibacter rhizovicinus indicates that it has a complex cell wall structure, which often contributes to its adaptability in various ecological niches. Understanding the traits of Luteibacter rhizovicinus strain LJ96 is essential for elucidating its ecological roles, particularly in rhizosphere interactions. The presence of this bacterium in soil environments may suggest its involvement in nutrient cycling or its potential as a bioindicator of soil health. Further research could reveal its specific functions and applications in agriculture or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusLuteibacter
SpeciesLuteibacter rhizovicinus
StrainDSM 16549 strain LJ96

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luteibacter rhizovicinus DSM 16549 strain LJ96 chromosome,

Gene Summary

Adenine Count

842045 bp

Thymine Count

839132 bp

Guanine Count

1542978 bp

Cytosine Count

1541331 bp

Genome Length

4765486 bp

Protein-coding Genes

4272 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaBJI69_RS11220Not AvailableNegative2480802 - 248188139553.6
tryptophan 2,3-dioxygenaseBJI69_RS11225Not AvailablePositive2482106 - 248295432736.4
peptide mfs transporterBJI69_RS11230Not AvailablePositive2483025 - 248453354589.0
marr family winged helix-turn-helix transcriptional regulatorBJI69_RS11235Not AvailableNegative2484648 - 248509716755.1
4-hydroxyphenylpyruvate dioxygenaseBJI69_RS11240Not AvailablePositive2485187 - 248627540650.1
homogentisate 1,2-dioxygenaseBJI69_RS11245Not AvailablePositive2486366 - 248767647950.3
fumarylacetoacetate hydrolase family proteinBJI69_RS11250Not AvailablePositive2487691 - 248867134906.5
hypothetical proteinBJI69_RS22290Not AvailablePositive2489095 - 248941211022.2
type i glyceraldehyde-3-phosphate dehydrogenaseBJI69_RS11260Not AvailableNegative2489538 - 249055436443.5
s1/p1 nucleaseBJI69_RS11265Not AvailablePositive2490729 - 249155030083.6

Displaying genes 2311 – 2320 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.