Urechidicola croceus strain LPB0138

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Urechidicola

Description

Urechidicola croceus strain LPB0138 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication mechanisms. The strain is cataloged under the accession number NZ_CP017478.1, providing a reference for researchers looking to access its genomic information. As a member of the microbiota, Urechidicola croceus may play a role in its ecological niche. While specific interactions and ecological functions are not detailed in the available data, the existence of a single replicon suggests a streamlined genetic organization, which could be advantageous for adaptation to its environment. This trait may reflect a specialized lifestyle or ecological role within its habitat, potentially influencing microbial community dynamics. Understanding the genomic characteristics of Urechidicola croceus strain LPB0138 can contribute to broader studies of microbial ecology, particularly in contexts where this organism is present. Its single-replicon structure might provide insights into evolutionary strategies and adaptability in various environments. Further research into its ecological roles and interactions could expand knowledge on the functions and significance of this strain within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusUrechidicola
SpeciesUrechidicola croceus
Strainstrain LPB0138

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Urechidicola croceus strain LPB0138 chromosome, complete genome.

Gene Summary

Adenine Count

1183353 bp

Thymine Count

1202850 bp

Guanine Count

517673 bp

Cytosine Count

522246 bp

Genome Length

3426122 bp

Protein-coding Genes

3017 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mosc domain-containing proteinLPB138_RS14915Not AvailablePositive3364581 - 336513820434.9
arginine decarboxylaseLPB138_RS14920Not AvailablePositive3365474 - 336687454619.1
agmatinaseLPB138_RS14925Not AvailablePositive3366864 - 336780235707.6
deoxyhypusine synthase family proteinLPB138_RS14930Not AvailablePositive3367835 - 336880336490.5
hypothetical proteinLPB138_RS14935Not AvailablePositive3368807 - 336912412315.7
duf2853 family proteinLPB138_RS14940Not AvailableNegative3369181 - 336951912526.3
molecular chaperone dnakLPB138_RS14945Not AvailablePositive3369751 - 337166168618.0
nitronate monooxygenase family proteinLPB138_RS14950Not AvailablePositive3372061 - 337300834172.7
chloramphenicol acetyltransferaseLPB138_RS14955Not AvailableNegative3373012 - 337363524107.6
peptidylprolyl isomeraseLPB138_RS14960Not AvailableNegative3373640 - 337430525795.8

Displaying genes 3011 – 3020 of 3067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.