Urechidicola croceus strain LPB0138

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Urechidicola

Description

Urechidicola croceus strain LPB0138 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication mechanisms. The strain is cataloged under the accession number NZ_CP017478.1, providing a reference for researchers looking to access its genomic information. As a member of the microbiota, Urechidicola croceus may play a role in its ecological niche. While specific interactions and ecological functions are not detailed in the available data, the existence of a single replicon suggests a streamlined genetic organization, which could be advantageous for adaptation to its environment. This trait may reflect a specialized lifestyle or ecological role within its habitat, potentially influencing microbial community dynamics. Understanding the genomic characteristics of Urechidicola croceus strain LPB0138 can contribute to broader studies of microbial ecology, particularly in contexts where this organism is present. Its single-replicon structure might provide insights into evolutionary strategies and adaptability in various environments. Further research into its ecological roles and interactions could expand knowledge on the functions and significance of this strain within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusUrechidicola
SpeciesUrechidicola croceus
Strainstrain LPB0138

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Urechidicola croceus strain LPB0138 chromosome, complete genome.

Gene Summary

Adenine Count

1183353 bp

Thymine Count

1202850 bp

Guanine Count

517673 bp

Cytosine Count

522246 bp

Genome Length

3426122 bp

Protein-coding Genes

3017 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication-associated recombination protein aLPB138_RS14330Not AvailableNegative3248588 - 324986247651.9
rhomboid family intramembrane serine proteaseLPB138_RS14335Not AvailablePositive3249959 - 325061825611.7
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbLPB138_RS14340Not AvailableNegative3250636 - 325137627002.6
hypothetical proteinLPB138_RS14345Not AvailableNegative3251456 - 325280548917.3
hypothetical proteinLPB138_RS14350Not AvailableNegative3252827 - 325375033081.1
ragb/susd family nutrient uptake outer membrane proteinLPB138_RS14355Not AvailableNegative3253780 - 325522252687.4
susc/raga family tonb-linked outer membrane proteinLPB138_RS14360Not AvailableNegative3255234 - 3258272110547.0
susd/ragb family nutrient-binding outer membrane lipoproteinLPB138_RS14365Not AvailableNegative3258486 - 325989550940.4
susc/raga family tonb-linked outer membrane proteinLPB138_RS14370Not AvailableNegative3259906 - 3263169118466.0
hypothetical proteinLPB138_RS14375Not AvailableNegative3263327 - 326501865509.7

Displaying genes 2891 – 2900 of 3067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.