Urechidicola croceus strain LPB0138

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Urechidicola

Description

Urechidicola croceus strain LPB0138 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication mechanisms. The strain is cataloged under the accession number NZ_CP017478.1, providing a reference for researchers looking to access its genomic information. As a member of the microbiota, Urechidicola croceus may play a role in its ecological niche. While specific interactions and ecological functions are not detailed in the available data, the existence of a single replicon suggests a streamlined genetic organization, which could be advantageous for adaptation to its environment. This trait may reflect a specialized lifestyle or ecological role within its habitat, potentially influencing microbial community dynamics. Understanding the genomic characteristics of Urechidicola croceus strain LPB0138 can contribute to broader studies of microbial ecology, particularly in contexts where this organism is present. Its single-replicon structure might provide insights into evolutionary strategies and adaptability in various environments. Further research into its ecological roles and interactions could expand knowledge on the functions and significance of this strain within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusUrechidicola
SpeciesUrechidicola croceus
Strainstrain LPB0138

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Urechidicola croceus strain LPB0138 chromosome, complete genome.

Gene Summary

Adenine Count

1183353 bp

Thymine Count

1202850 bp

Guanine Count

517673 bp

Cytosine Count

522246 bp

Genome Length

3426122 bp

Protein-coding Genes

3017 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
permeaseLPB138_RS11560Not AvailablePositive2606747 - 260797346022.9
pepsy domain-containing proteinLPB138_RS11565Not AvailablePositive2608005 - 260871527840.4
duf305 domain-containing proteinLPB138_RS11570Not AvailablePositive2608738 - 260922018194.7
efflux rnd transporter periplasmic adaptor subunitLPB138_RS11575Not AvailablePositive2609232 - 261103465860.3
hypothetical proteinLPB138_RS15900Not AvailablePositive2611107 - 26112836735.43
arac family transcriptional regulatorLPB138_RS11580Not AvailablePositive2611296 - 261186221503.0
metalloregulator arsr/smtb family transcription factorLPB138_RS11585Not AvailablePositive2611981 - 261235213862.0
mercuric transport protein mertpLPB138_RS11590Not AvailablePositive2612364 - 261296021685.0
ynce family proteinLPB138_RS11595Not AvailablePositive2612972 - 261394935939.1
heavy-metal-associated domain-containing proteinLPB138_RS11600Not AvailablePositive2613967 - 261430812386.1

Displaying genes 2331 – 2340 of 3067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.