Urechidicola croceus strain LPB0138

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Urechidicola

Description

Urechidicola croceus strain LPB0138 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication mechanisms. The strain is cataloged under the accession number NZ_CP017478.1, providing a reference for researchers looking to access its genomic information. As a member of the microbiota, Urechidicola croceus may play a role in its ecological niche. While specific interactions and ecological functions are not detailed in the available data, the existence of a single replicon suggests a streamlined genetic organization, which could be advantageous for adaptation to its environment. This trait may reflect a specialized lifestyle or ecological role within its habitat, potentially influencing microbial community dynamics. Understanding the genomic characteristics of Urechidicola croceus strain LPB0138 can contribute to broader studies of microbial ecology, particularly in contexts where this organism is present. Its single-replicon structure might provide insights into evolutionary strategies and adaptability in various environments. Further research into its ecological roles and interactions could expand knowledge on the functions and significance of this strain within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusUrechidicola
SpeciesUrechidicola croceus
Strainstrain LPB0138

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Urechidicola croceus strain LPB0138 chromosome, complete genome.

Gene Summary

Adenine Count

1183353 bp

Thymine Count

1202850 bp

Guanine Count

517673 bp

Cytosine Count

522246 bp

Genome Length

3426122 bp

Protein-coding Genes

3017 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional riboflavin kinase/fad synthetaseLPB138_RS09750Not AvailablePositive2165366 - 216625033808.0
hypothetical proteinLPB138_RS09755Not AvailablePositive2166267 - 216679419961.1
serine--trna ligaseLPB138_RS09760Not AvailablePositive2166856 - 216813047631.7
hypothetical proteinLPB138_RS15890Not AvailableNegative2168123 - 21682665574.89
tetratricopeptide repeat proteinLPB138_RS09765Not AvailablePositive2168471 - 217017466276.7
duf4286 family proteinLPB138_RS09770Not AvailablePositive2170206 - 217052312081.5
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaLPB138_RS09775Not AvailablePositive2170533 - 217131529969.5
magnesium transporterLPB138_RS09780Not AvailablePositive2171299 - 217265450133.8
rna methyltransferaseLPB138_RS09785Not AvailableNegative2172651 - 217318120086.3
glycosyltransferase family 39 proteinLPB138_RS09790Not AvailableNegative2173218 - 217487664365.6

Displaying genes 1961 – 1970 of 3067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.