Urechidicola croceus strain LPB0138

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Urechidicola

Description

Urechidicola croceus strain LPB0138 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication mechanisms. The strain is cataloged under the accession number NZ_CP017478.1, providing a reference for researchers looking to access its genomic information. As a member of the microbiota, Urechidicola croceus may play a role in its ecological niche. While specific interactions and ecological functions are not detailed in the available data, the existence of a single replicon suggests a streamlined genetic organization, which could be advantageous for adaptation to its environment. This trait may reflect a specialized lifestyle or ecological role within its habitat, potentially influencing microbial community dynamics. Understanding the genomic characteristics of Urechidicola croceus strain LPB0138 can contribute to broader studies of microbial ecology, particularly in contexts where this organism is present. Its single-replicon structure might provide insights into evolutionary strategies and adaptability in various environments. Further research into its ecological roles and interactions could expand knowledge on the functions and significance of this strain within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusUrechidicola
SpeciesUrechidicola croceus
Strainstrain LPB0138

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Urechidicola croceus strain LPB0138 chromosome, complete genome.

Gene Summary

Adenine Count

1183353 bp

Thymine Count

1202850 bp

Guanine Count

517673 bp

Cytosine Count

522246 bp

Genome Length

3426122 bp

Protein-coding Genes

3017 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m42 family metallopeptidaseLPB138_RS00615Not AvailableNegative121314 - 12240540580.9
duf4294 domain-containing proteinLPB138_RS00620Not AvailablePositive122660 - 12329825675.9
16s ribosomal rnaNot AvailableNot AvailablePositive123886 - 125407Not Available
Trna-ileNot AvailableNot AvailablePositive125494 - 125567Not Available
Trna-alaNot AvailableNot AvailablePositive125719 - 125792Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive125902 - 128780Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive128908 - 129016Not Available
amidohydrolase family proteinLPB138_RS00650Not AvailablePositive129159 - 13026542902.7
type ix secretion system protein porqLPB138_RS00655Not AvailablePositive130364 - 13138038003.1
(d)cmp kinaseLPB138_RS00660Not AvailablePositive131392 - 13207526045.2

Displaying genes 121 – 130 of 3067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.