Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | LPB072_RS04825 | Not Available | Positive | 1006969 - 1007631 | 23616.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | LPB072_RS04830 | Not Available | Positive | 1007659 - 1008399 | 26069.1 |
| imidazole glycerol phosphate synthase subunit hisf | LPB072_RS04835 | Not Available | Positive | 1008531 - 1009310 | 27416.6 |
| hypothetical protein | LPB072_RS04840 | Not Available | Negative | 1009328 - 1009840 | 18862.1 |
| phosphoribosyl-amp cyclohydrolase | LPB072_RS04845 | Not Available | Positive | 1009965 - 1010363 | 15222.1 |
| phosphoribosyl-atp diphosphatase | LPB072_RS04850 | Not Available | Positive | 1010360 - 1010740 | 13506.0 |
| duf4870 family protein | LPB072_RS04855 | Not Available | Positive | 1010763 - 1011161 | 14618.0 |
| histidine triad nucleotide-binding protein | LPB072_RS04860 | Not Available | Positive | 1011173 - 1011535 | 13378.3 |
| barstar family protein | LPB072_RS04865 | Not Available | Positive | 1011653 - 1011885 | 8414.46 |
| sec-independent protein translocase protein tatb | LPB072_RS04870 | Not Available | Positive | 1011969 - 1012448 | 17573.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
