Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgl | LPB072_RS04675 | Not Available | Positive | 974265 - 975482 | 42392.1 |
| hdod domain-containing protein | LPB072_RS04680 | Not Available | Positive | 975515 - 976765 | 45644.0 |
| 7-cyano-7-deazaguanine synthase quec | LPB072_RS04685 | Not Available | Positive | 976860 - 977630 | 28158.8 |
| hypothetical protein | LPB072_RS04690 | Not Available | Positive | 977935 - 979458 | 56431.6 |
| alcohol dehydrogenase family protein | LPB072_RS04695 | Not Available | Negative | 979735 - 980793 | 36882.4 |
| barstar family protein | LPB072_RS23820 | Not Available | Negative | 980933 - 981207 | 9942.01 |
| barstar family protein | LPB072_RS04705 | Not Available | Negative | 981247 - 981609 | 13339.5 |
| 3-dehydroquinate synthase | LPB072_RS04710 | Not Available | Positive | 981743 - 982861 | 39368.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | LPB072_RS04715 | Not Available | Positive | 982863 - 984038 | 43715.0 |
| cynx/nimt family mfs transporter | LPB072_RS04720 | Not Available | Positive | 984035 - 985255 | 42015.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
