Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | LPB072_RS04420 | Not Available | Positive | 928572 - 929708 | 41695.6 |
| response regulator transcription factor | LPB072_RS04425 | Not Available | Positive | 929686 - 930315 | 23010.9 |
| hypothetical protein | LPB072_RS04435 | Not Available | Positive | 930632 - 931066 | 15865.3 |
| flagellar biosynthetic protein flir | LPB072_RS04440 | Not Available | Negative | 931073 - 931840 | 27202.4 |
| flagellar biosynthesis protein fliq | LPB072_RS04445 | Not Available | Negative | 931987 - 932256 | 9437.0 |
| flagellar type iii secretion system pore protein flip | LPB072_RS04450 | Not Available | Negative | 932335 - 933108 | 27844.9 |
| flio/mopb family protein | LPB072_RS04455 | Not Available | Negative | 933095 - 933460 | 12895.0 |
| flagellar motor switch protein flin | LPB072_RS04460 | Not Available | Negative | 933600 - 934046 | 15773.6 |
| flagellar motor switch protein flim | LPB072_RS04465 | Not Available | Negative | 934036 - 935040 | 37562.2 |
| flagellar basal body-associated protein flil | LPB072_RS04470 | Not Available | Negative | 935059 - 935634 | 20422.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
