Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate granule-associated phasin | LPB072_RS00410 | Not Available | Negative | 83552 - 83962 | 14766.9 |
| plp-dependent aminotransferase family protein | LPB072_RS00415 | Not Available | Negative | 84162 - 85688 | 56081.4 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | LPB072_RS00420 | Not Available | Positive | 85890 - 86696 | 28577.3 |
| glutamine synthetase family protein | LPB072_RS00425 | Not Available | Positive | 86779 - 88149 | 51651.8 |
| aspartate aminotransferase family protein | LPB072_RS00430 | Not Available | Positive | 88261 - 89700 | 51970.6 |
| extracellular solute-binding protein | LPB072_RS00435 | Not Available | Positive | 89846 - 91027 | 42368.6 |
| abc transporter atp-binding protein | LPB072_RS00440 | Not Available | Positive | 91144 - 92238 | 40193.5 |
| abc transporter permease | LPB072_RS00445 | Not Available | Positive | 92368 - 93273 | 34079.8 |
| abc transporter permease | LPB072_RS00450 | Not Available | Positive | 93498 - 94358 | 31745.6 |
| comec/rec2 family competence protein | LPB072_RS00455 | Not Available | Positive | 94504 - 95490 | 36077.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
