Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | LPB072_RS04320 | Not Available | Positive | 906250 - 906678 | 15538.0 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS04325 | Not Available | Positive | 906678 - 907475 | 27964.5 |
| nadp-dependent oxidoreductase | LPB072_RS04330 | Not Available | Positive | 907512 - 908525 | 35808.6 |
| isovaleryl-coa dehydrogenase | LPB072_RS04335 | Not Available | Positive | 908684 - 910333 | 59376.1 |
| glutathione s-transferase family protein | LPB072_RS04340 | Not Available | Positive | 910352 - 911287 | 33707.6 |
| gnat family n-acetyltransferase | LPB072_RS04345 | Not Available | Positive | 911284 - 911766 | 17486.9 |
| sdr family oxidoreductase | LPB072_RS04350 | Not Available | Positive | 911805 - 912710 | 31918.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | LPB072_RS04355 | Not Available | Positive | 912717 - 913262 | 18882.9 |
| multidrug effflux mfs transporter | LPB072_RS04360 | Not Available | Positive | 913329 - 914543 | 41672.6 |
| amp-binding protein | LPB072_RS04365 | Not Available | Positive | 914689 - 916362 | 61581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
