Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | LPB072_RS04170 | Not Available | Negative | 870395 - 871183 | 28278.1 |
| abc transporter substrate-binding protein | LPB072_RS04175 | Not Available | Negative | 871219 - 872424 | 43226.0 |
| dinb family protein | LPB072_RS04180 | Not Available | Positive | 872513 - 872722 | 7764.13 |
| long-chain fatty acid--coa ligase | LPB072_RS04185 | Not Available | Negative | 873244 - 874950 | 62583.2 |
| acyl-coa dehydrogenase family protein | LPB072_RS04190 | Not Available | Negative | 875009 - 876232 | 44839.8 |
| phosphotransferase | LPB072_RS04195 | Not Available | Negative | 876342 - 877424 | 39610.2 |
| sdr family oxidoreductase | LPB072_RS04200 | Not Available | Negative | 877421 - 878194 | 26920.8 |
| acetyl-coa c-acyltransferase | LPB072_RS04205 | Not Available | Negative | 878230 - 879408 | 41117.6 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | LPB072_RS04210 | Not Available | Negative | 879560 - 881644 | 73316.8 |
| iclr family transcriptional regulator | LPB072_RS04215 | Not Available | Negative | 881966 - 882709 | 26965.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
