Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | LPB072_RS04120 | Not Available | Positive | 860087 - 860950 | 30127.9 |
| branched-chain amino acid abc transporter permease | LPB072_RS04125 | Not Available | Positive | 860955 - 861983 | 37247.5 |
| abc transporter atp-binding protein | LPB072_RS04130 | Not Available | Positive | 861976 - 862740 | 27660.5 |
| abc transporter atp-binding protein | LPB072_RS04135 | Not Available | Positive | 862727 - 863434 | 25225.9 |
| abc transporter substrate-binding protein | LPB072_RS04140 | Not Available | Positive | 863517 - 864686 | 41376.9 |
| histidine phosphatase family protein | LPB072_RS04145 | Not Available | Positive | 864952 - 865575 | 21852.1 |
| crp/fnr family transcriptional regulator | LPB072_RS04150 | Not Available | Positive | 866325 - 866969 | 23921.9 |
| aldehyde dehydrogenase family protein | LPB072_RS04155 | Not Available | Negative | 867203 - 868633 | 50617.7 |
| taud/tfda dioxygenase family protein | LPB072_RS04160 | Not Available | Negative | 868675 - 869601 | 34721.5 |
| abc transporter permease | LPB072_RS04165 | Not Available | Negative | 869650 - 870405 | 27052.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
