Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemerythrin domain-containing protein | LPB072_RS00360 | Not Available | Positive | 72932 - 73528 | 23013.6 |
| ybfb/yjij family mfs transporter | LPB072_RS00365 | Not Available | Positive | 73941 - 75176 | 42931.0 |
| (2fe-2s)-binding protein | LPB072_RS00370 | Not Available | Positive | 75269 - 75727 | 16084.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | LPB072_RS00375 | Not Available | Positive | 75729 - 77987 | 79459.1 |
| shoct domain-containing protein | LPB072_RS00380 | Not Available | Positive | 78272 - 79123 | 30204.3 |
| glutathione transferase gsta | LPB072_RS00385 | Not Available | Negative | 79282 - 79887 | 21743.2 |
| hexameric tyrosine-coordinated heme protein | LPB072_RS00390 | Not Available | Negative | 80044 - 80280 | 8730.33 |
| agmatinase | LPB072_RS00395 | Not Available | Positive | 80586 - 81593 | 35647.4 |
| nad(p)/fad-dependent oxidoreductase | LPB072_RS00400 | Not Available | Positive | 81624 - 82937 | 47521.0 |
| hypothetical protein | LPB072_RS00405 | Not Available | Negative | 82978 - 83466 | 18685.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
