Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dde-type integrase/transposase/recombinase | LPB072_RS22950 | Not Available | Positive | 804187 - 804639 | 16907.5 |
| shikimate kinase | LPB072_RS22955 | Not Available | Negative | 804782 - 805378 | 22119.8 |
| hypothetical protein | LPB072_RS23340 | Not Available | Negative | 805397 - 805843 | 15349.1 |
| type iv pilus secretin pilq | LPB072_RS03895 | Not Available | Negative | 805851 - 807986 | 75709.9 |
| pilus assembly protein pilp | LPB072_RS03900 | Not Available | Negative | 808004 - 808555 | 20555.7 |
| type 4a pilus biogenesis protein pilo | LPB072_RS03905 | Not Available | Negative | 808552 - 809241 | 25569.8 |
| piln domain-containing protein | LPB072_RS03910 | Not Available | Negative | 809250 - 809873 | 23377.3 |
| pilus assembly protein pilm | LPB072_RS03915 | Not Available | Negative | 809870 - 810949 | 38787.4 |
| penicillin-binding protein 1a | LPB072_RS03920 | Not Available | Positive | 811221 - 813629 | 87686.0 |
| iron donor protein cyay | LPB072_RS03925 | Not Available | Negative | 813619 - 813951 | 12145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
