Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | LPB072_RS03840 | Not Available | Positive | 795373 - 795771 | 14885.4 |
| Trna-met | Not Available | Not Available | Positive | 795789 - 795865 | Not Available |
| srpbcc family protein | LPB072_RS03850 | Not Available | Negative | 796868 - 797305 | 16179.6 |
| gnat family n-acetyltransferase | LPB072_RS03855 | Not Available | Negative | 797314 - 797757 | 16500.6 |
| abc transporter permease | LPB072_RS03860 | Not Available | Negative | 798141 - 799349 | 41773.7 |
| abc transporter permease | LPB072_RS03865 | Not Available | Negative | 799356 - 800498 | 40593.1 |
| abc transporter atp-binding protein | LPB072_RS03870 | Not Available | Negative | 800498 - 801205 | 25512.1 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS03875 | Not Available | Negative | 801202 - 802326 | 40116.1 |
| helix-turn-helix domain-containing protein | LPB072_RS03880 | Not Available | Negative | 802397 - 803473 | 38731.2 |
| transposase | LPB072_RS24175 | Not Available | Positive | 803655 - 803789 | 4815.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
