Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l18 | LPB072_RS03795 | Not Available | Positive | 789562 - 789927 | 12949.6 |
| 30s ribosomal protein s5 | LPB072_RS03800 | Not Available | Positive | 789945 - 790463 | 17874.8 |
| 50s ribosomal protein l30 | LPB072_RS03805 | Not Available | Positive | 790478 - 790660 | 6652.23 |
| 50s ribosomal protein l15 | LPB072_RS03810 | Not Available | Positive | 790675 - 791109 | 15091.5 |
| preprotein translocase subunit secy | LPB072_RS03815 | Not Available | Positive | 791130 - 792437 | 47188.0 |
| 50s ribosomal protein l36 | LPB072_RS22945 | Not Available | Positive | 792485 - 792598 | 4320.53 |
| 30s ribosomal protein s13 | LPB072_RS03820 | Not Available | Positive | 792622 - 792987 | 13712.0 |
| 30s ribosomal protein s11 | LPB072_RS03825 | Not Available | Positive | 793006 - 793410 | 14104.9 |
| 30s ribosomal protein s4 | LPB072_RS03830 | Not Available | Positive | 793582 - 794205 | 23361.0 |
| dna-directed rna polymerase subunit alpha | LPB072_RS03835 | Not Available | Positive | 794296 - 795282 | 36213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
