Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | LPB072_RS03640 | Not Available | Positive | 759126 - 760280 | 41140.3 |
| m20 aminoacylase family protein | LPB072_RS03645 | Not Available | Positive | 760413 - 761642 | 44296.9 |
| m14 family metallopeptidase | LPB072_RS03650 | Not Available | Positive | 761639 - 762760 | 40438.4 |
| primosomal protein n' | LPB072_RS03655 | Not Available | Negative | 762761 - 764908 | 77534.4 |
| uroporphyrinogen decarboxylase | LPB072_RS03660 | Not Available | Negative | 765298 - 766392 | 39949.8 |
| cupin domain-containing protein | LPB072_RS03665 | Not Available | Positive | 766837 - 767322 | 17509.7 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | LPB072_RS03670 | Not Available | Positive | 767413 - 767778 | 13879.6 |
| gfa family protein | LPB072_RS03675 | Not Available | Positive | 767909 - 768331 | 15008.8 |
| hypothetical protein | LPB072_RS03680 | Not Available | Positive | 768561 - 768764 | 7249.32 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | LPB072_RS03690 | Not Available | Negative | 769161 - 770279 | 40923.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
