Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS03545 | Not Available | Positive | 736435 - 737172 | 25956.2 |
| hemerythrin domain-containing protein | LPB072_RS03550 | Not Available | Negative | 737183 - 737725 | 20677.3 |
| duf6923 family protein | LPB072_RS03555 | Not Available | Negative | 737899 - 739554 | 57782.5 |
| lysr family transcriptional regulator | LPB072_RS03560 | Not Available | Negative | 739811 - 740746 | 34197.4 |
| glutathione s-transferase family protein | LPB072_RS03565 | Not Available | Positive | 740848 - 741471 | 22463.5 |
| pyridoxamine 5'-phosphate oxidase family protein | LPB072_RS03570 | Not Available | Positive | 741468 - 742418 | 34188.8 |
| 3-hydroxybutyryl-coa dehydrogenase | LPB072_RS03575 | Not Available | Negative | 742530 - 743384 | 30049.8 |
| antibiotic biosynthesis monooxygenase family protein | LPB072_RS03580 | Not Available | Positive | 743543 - 743842 | 11093.2 |
| arginase | LPB072_RS03585 | Not Available | Negative | 744045 - 744965 | 32938.7 |
| pas domain-containing protein | LPB072_RS03590 | Not Available | Negative | 745028 - 748309 | 122406.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
