Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferase | LPB072_RS00310 | Not Available | Negative | 60801 - 63479 | 95970.9 |
| histone deacetylase family protein | LPB072_RS00315 | Not Available | Negative | 63592 - 64518 | 33373.7 |
| 5-demethoxyubiquinol-8 5-hydroxylase ubim | LPB072_RS00320 | Not Available | Negative | 64653 - 65867 | 44117.3 |
| spy/cpxp family protein refolding chaperone | LPB072_RS00325 | Not Available | Negative | 66010 - 66639 | 23475.1 |
| chromate resistance protein chrb domain-containing protein | LPB072_RS00330 | Not Available | Positive | 66825 - 67766 | 33915.4 |
| chromate efflux transporter | LPB072_RS00335 | Not Available | Positive | 67763 - 69127 | 48669.0 |
| rhodanese-like domain-containing protein | LPB072_RS00340 | Not Available | Positive | 69146 - 69505 | 12523.1 |
| merr family dna-binding protein | LPB072_RS00345 | Not Available | Negative | 69502 - 69954 | 16824.2 |
| heavy-metal-associated domain-containing protein | LPB072_RS00350 | Not Available | Negative | 69951 - 70148 | 7100.3 |
| heavy metal translocating p-type atpase | LPB072_RS00355 | Not Available | Positive | 70390 - 72828 | 84465.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
