Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit delta | LPB072_RS03300 | Not Available | Positive | 688376 - 688906 | 18708.6 |
| f0f1 atp synthase subunit alpha | LPB072_RS03305 | Not Available | Positive | 688968 - 690524 | 55484.7 |
| f0f1 atp synthase subunit gamma | LPB072_RS03310 | Not Available | Positive | 690562 - 691428 | 31335.0 |
| f0f1 atp synthase subunit beta | LPB072_RS03315 | Not Available | Positive | 691468 - 692874 | 50649.0 |
| f0f1 atp synthase subunit epsilon | LPB072_RS03320 | Not Available | Positive | 692994 - 693410 | 14653.6 |
| crp/fnr family transcriptional regulator | LPB072_RS03325 | Not Available | Positive | 693531 - 694124 | 21555.3 |
| tpm domain-containing protein | LPB072_RS03330 | Not Available | Negative | 694171 - 694701 | 19949.0 |
| barstar family protein | LPB072_RS24170 | Not Available | Negative | 694705 - 695621 | 33025.2 |
| lema family protein | LPB072_RS03340 | Not Available | Negative | 695618 - 696226 | 22268.6 |
| yybh family protein | LPB072_RS03345 | Not Available | Positive | 696388 - 696825 | 15812.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
