Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | LPB072_RS03200 | Not Available | Negative | 669877 - 670320 | 15969.0 |
| protein-disulfide reductase dsbd family protein | LPB072_RS03205 | Not Available | Negative | 670359 - 672578 | 77314.8 |
| sam-dependent methyltransferase | LPB072_RS03210 | Not Available | Positive | 672834 - 674060 | 46046.6 |
| barstar family protein | LPB072_RS03215 | Not Available | Negative | 674076 - 674818 | 26152.4 |
| creatininase family protein | LPB072_RS03220 | Not Available | Positive | 674862 - 675704 | 29824.8 |
| glycosyltransferase family 4 protein | LPB072_RS03225 | Not Available | Negative | 675936 - 677141 | 44882.8 |
| hypothetical protein | LPB072_RS03230 | Not Available | Positive | 677298 - 677906 | 22794.7 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | LPB072_RS03235 | Not Available | Negative | 677925 - 679640 | 63686.6 |
| archaetidylserine decarboxylase | LPB072_RS03240 | Not Available | Positive | 679639 - 680562 | 34363.1 |
| udp-2,3-diacylglucosamine diphosphatase | LPB072_RS03245 | Not Available | Positive | 680700 - 681542 | 32014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
