Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | LPB072_RS03150 | Not Available | Positive | 655735 - 656913 | 41118.7 |
| atp-binding cassette domain-containing protein | LPB072_RS03155 | Not Available | Positive | 656910 - 657692 | 28100.0 |
| rok family transcriptional regulator | LPB072_RS03160 | Not Available | Positive | 657721 - 658887 | 40572.0 |
| xylulokinase | LPB072_RS03165 | Not Available | Positive | 658893 - 660341 | 50187.2 |
| xylose isomerase | LPB072_RS03170 | Not Available | Positive | 660378 - 661691 | 48720.7 |
| gfo/idh/moca family protein | LPB072_RS03175 | Not Available | Positive | 661760 - 662764 | 36334.4 |
| chaperonin groel | LPB072_RS03180 | Not Available | Negative | 662967 - 664613 | 57292.4 |
| co-chaperone groes | LPB072_RS03185 | Not Available | Negative | 664693 - 664986 | 10425.7 |
| sdr family oxidoreductase | LPB072_RS03190 | Not Available | Negative | 665210 - 666007 | 27851.2 |
| choice-of-anchor o protein | LPB072_RS03195 | Not Available | Negative | 666261 - 669131 | 102705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
