Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 aminoacylase family protein | LPB072_RS03100 | Not Available | Positive | 643220 - 644461 | 44259.2 |
| abc transporter substrate-binding protein | LPB072_RS03105 | Not Available | Positive | 644506 - 646080 | 57566.8 |
| abc transporter permease | LPB072_RS03110 | Not Available | Positive | 646154 - 647065 | 31996.6 |
| abc transporter atp-binding protein | LPB072_RS03115 | Not Available | Positive | 647072 - 648061 | 35195.9 |
| barstar family protein | LPB072_RS03120 | Not Available | Positive | 648211 - 649220 | 37507.1 |
| murr/rpir family transcriptional regulator | LPB072_RS03125 | Not Available | Negative | 649470 - 650318 | 30563.1 |
| transaldolase | LPB072_RS03130 | Not Available | Positive | 650389 - 651330 | 33778.6 |
| vanadium-dependent haloperoxidase | LPB072_RS03135 | Not Available | Negative | 651417 - 652763 | 49053.1 |
| crtac1 family protein | LPB072_RS03140 | Not Available | Negative | 652760 - 654391 | 58567.7 |
| d-xylose abc transporter substrate-binding protein | LPB072_RS03145 | Not Available | Positive | 654619 - 655638 | 35415.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
