Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system inner membrane protein gspf | LPB072_RS03000 | Not Available | Negative | 622765 - 623994 | 43662.3 |
| type ii secretion system atpase gspe | LPB072_RS03005 | Not Available | Negative | 624089 - 625531 | 52758.7 |
| type ii secretion system secretin gspd | LPB072_RS03010 | Not Available | Negative | 625551 - 627677 | 74086.7 |
| type ii secretion system protein n | LPB072_RS03015 | Not Available | Negative | 627696 - 628493 | 28225.5 |
| type ii secretion system protein gspm | LPB072_RS03020 | Not Available | Negative | 628490 - 629056 | 19748.8 |
| type ii secretion system protein gspl | LPB072_RS03025 | Not Available | Negative | 629074 - 630333 | 44692.1 |
| type ii secretion system minor pseudopilin gspk | LPB072_RS03030 | Not Available | Negative | 630450 - 631436 | 35840.7 |
| type ii secretion system protein j | LPB072_RS03035 | Not Available | Negative | 631442 - 632191 | 27259.5 |
| type ii secretion system minor pseudopilin gspi | LPB072_RS03040 | Not Available | Negative | 632192 - 632566 | 13182.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | LPB072_RS03045 | Not Available | Negative | 632563 - 633027 | 16477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
