Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyphenylacetyl-coa thioesterase paai | LPB072_RS02950 | Not Available | Positive | 609062 - 609466 | 14561.5 |
| phenylacetate--coa ligase paak | LPB072_RS02955 | Not Available | Positive | 609463 - 610758 | 47510.2 |
| xopaw family type iii secretion system calcium-binding effector | LPB072_RS02960 | Not Available | Negative | 610786 - 611658 | 29134.6 |
| response regulator | LPB072_RS02965 | Not Available | Positive | 611920 - 612660 | 27401.1 |
| atp-binding protein | LPB072_RS02970 | Not Available | Positive | 612657 - 613751 | 39396.8 |
| abc transporter atp-binding protein/permease | LPB072_RS02975 | Not Available | Negative | 613771 - 615540 | 66011.1 |
| duf1566 domain-containing protein | LPB072_RS02980 | Not Available | Positive | 615723 - 617525 | 64093.1 |
| duf1566 domain-containing protein | LPB072_RS02985 | Not Available | Positive | 617580 - 619448 | 67153.9 |
| duf1566 domain-containing protein | LPB072_RS02990 | Not Available | Positive | 619499 - 621316 | 63985.1 |
| 5'-nucleotidase | LPB072_RS02995 | Not Available | Negative | 621540 - 622442 | 33069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
