Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | LPB072_RS02850 | Not Available | Negative | 588328 - 589746 | 48904.6 |
| histone h1-like dna-binding protein | LPB072_RS02855 | Not Available | Negative | 589929 - 590540 | 20234.2 |
| ribonucleotide-diphosphate reductase subunit beta | LPB072_RS02860 | Not Available | Negative | 590774 - 591922 | 43629.1 |
| ribonucleoside-diphosphate reductase subunit alpha | LPB072_RS02865 | Not Available | Negative | 592064 - 594964 | 107803.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | LPB072_RS02870 | Not Available | Negative | 595404 - 596033 | 23206.2 |
| sigma-54-dependent transcriptional regulator | LPB072_RS02875 | Not Available | Negative | 596017 - 597498 | 53873.3 |
| sensor histidine kinase | LPB072_RS02880 | Not Available | Negative | 597562 - 599367 | 66012.7 |
| pp0621 family protein | LPB072_RS24050 | Not Available | Negative | 599390 - 599629 | 8836.75 |
| inner membrane protein ypjd | LPB072_RS02890 | Not Available | Negative | 599639 - 600439 | 29154.6 |
| signal recognition particle protein | LPB072_RS02895 | Not Available | Positive | 600607 - 601977 | 49070.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
