Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | LPB072_RS02800 | Not Available | Negative | 578490 - 579533 | 39277.3 |
| potassium channel family protein | LPB072_RS02805 | Not Available | Positive | 579573 - 580016 | 16349.1 |
| class i sam-dependent methyltransferase | LPB072_RS02810 | Not Available | Positive | 580013 - 580882 | 32158.1 |
| hypothetical protein | LPB072_RS02815 | Not Available | Negative | 580892 - 581557 | 23099.1 |
| hypothetical protein | LPB072_RS02820 | Not Available | Positive | 582092 - 582358 | 10037.2 |
| archaetidylserine decarboxylase | LPB072_RS02825 | Not Available | Positive | 582776 - 583639 | 31349.7 |
| formate-dependent phosphoribosylglycinamide formyltransferase | LPB072_RS02830 | Not Available | Positive | 583686 - 584888 | 42774.7 |
| abc transporter permease | LPB072_RS02835 | Not Available | Negative | 584997 - 586205 | 42313.6 |
| abc transporter atp-binding protein | LPB072_RS02840 | Not Available | Negative | 586208 - 586981 | 27858.4 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS02845 | Not Available | Negative | 586978 - 588297 | 45748.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
