Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | LPB072_RS02690 | Not Available | Negative | 554900 - 555427 | 19723.8 |
| barstar family protein | LPB072_RS02695 | Not Available | Negative | 555493 - 556413 | 33647.5 |
| trap transporter substrate-binding protein | LPB072_RS02700 | Not Available | Negative | 556621 - 557640 | 37223.9 |
| two-component system sensor histidine kinase ntrb | LPB072_RS02710 | Not Available | Positive | 557827 - 559932 | 77065.4 |
| response regulator transcription factor | LPB072_RS02715 | Not Available | Positive | 559929 - 560549 | 22996.3 |
| phenylacetate--coa ligase family protein | LPB072_RS02720 | Not Available | Negative | 560573 - 561826 | 44278.8 |
| abc transporter atp-binding protein | LPB072_RS02725 | Not Available | Negative | 561953 - 562765 | 29936.2 |
| abc transporter substrate-binding protein | LPB072_RS02730 | Not Available | Negative | 562981 - 564318 | 48433.2 |
| branched-chain amino acid abc transporter permease | LPB072_RS02735 | Not Available | Negative | 564454 - 565530 | 39265.0 |
| branched-chain amino acid abc transporter permease | LPB072_RS02740 | Not Available | Negative | 565689 - 566618 | 33237.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
